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Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing

Python 81 7 Updated Dec 4, 2023

The official implementation of the AAAI'24 paper Cross-Gate MLP with Protein Complex Invariant Embedding is A One-Shot Antibody Designer.

Python 8 1 Updated Dec 28, 2023

PyTorch code for KDD 2023 paper "Pre-training Antibody Language Models for Antigen-Specific Computational Antibody Design"

Python 50 5 Updated Nov 14, 2023

Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.

Python 54 10 Updated Oct 25, 2023

Antibody-specific masked language model

Python 42 13 Updated Jul 16, 2023

Guiding diffusion models for antibody sequence and structure co-design with developability properties.

Python 29 3 Updated Nov 7, 2024

Source code of the paper "Protein Sequence and Structure Co-Design with Equivariant Translation"

Python 22 Updated Sep 18, 2023

SMSBoom - Deprecate: Due to judicial reasons, the repository has been suspended!

Python 15,355 3,672 Updated Mar 20, 2024

🐫 CAMEL: Finding the Scaling Law of Agents. The first and the best multi-agent framework. https://www.camel-ai.org

Python 5,935 730 Updated Jan 3, 2025

List of papers about Proteins Design using Deep Learning

1,517 182 Updated Dec 27, 2024

Generative Language Modeling for Antibody Design

Python 131 26 Updated Oct 5, 2024
Python 105 23 Updated Apr 1, 2023

Sanguosha (三国杀, a.k.a. Legend of Three Kingdoms, LTK) written in Qt and Lua.

Lua 481 62 Updated Jan 2, 2025

The official implementation for ICLR23 spotlight paper "DIFFormer: Scalable (Graph) Transformers Induced by Energy Constrained Diffusion"

Python 304 32 Updated Aug 15, 2024

Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)

Jupyter Notebook 31 3 Updated Dec 11, 2023
Python 38 2 Updated Oct 25, 2022

SurfGen: Learning on Topological Surface and Geometric Structure for 3D Molecular Generation

Python 59 12 Updated Nov 23, 2024

Making Protein Design accessible to all via Google Colab!

Python 657 153 Updated Dec 2, 2024

E(3) equivariant graph neural network for PPI site prediction

Python 9 2 Updated Sep 18, 2023

[Cell Research] Deep learning-based rapid generation of broadly reactive antibodies against SARS-CoV-2 and its Omicron variant

Python 31 2 Updated Jul 26, 2024
Python 16 2 Updated Nov 12, 2022

Implementation for SE(3) diffusion model with application to protein backbone generation

Python 343 55 Updated Jul 3, 2023

✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)

Python 289 44 Updated Jun 29, 2023

ChatLaw:A Powerful LLM Tailored for Chinese Legal. 中文法律大模型

7,036 549 Updated Jun 4, 2024
HTML 1 Updated Apr 11, 2023

Use ChatGPT to summarize the arXiv papers. 全流程加速科研,利用chatgpt进行论文全文总结+专业翻译+润色+审稿+审稿回复

Python 18,634 1,946 Updated Apr 4, 2024
Jupyter Notebook 7 2 Updated Mar 8, 2022

This is the official implementation for "Do Transformers Really Perform Bad for Graph Representation?".

Python 13 5 Updated Aug 20, 2021

Graphormer is a general-purpose deep learning backbone for molecular modeling.

Python 2,184 342 Updated Jun 7, 2024

实现文字点选、选字、选择、点触验证码识别,基于pytorch训练

Python 1,377 428 Updated Sep 18, 2024
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