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Minimal but speedy quality control for nanopore reads in Rust 🐻
Specifications of SAM/BAM and related high-throughput sequencing file formats
Nextflow pipeline for analysis of direct RNA Nanopore reads
Nanopore RNA-Seq data from the Singapore Nanopore-Expression Project
Command-line tool that analyses ONT alignments (.bam) to report quality control statistics
An R package for finding non-adenosine residues in poly(A) tails of ONT direct RNA sequencing reads
With RNArtist, you construct a collection of RNA structures that can be gathered into RNA families, projects,...
Code related to the Biobrick-directed Gibson assembly project
Final Project: Primer Design for Gibson Assembly
R scripts for Gibson Assembly and Golden Gate Assembly cloning.
Gibson Assembly mix calculator for molecular biology
Gibson Assembly calculator for 2-,3-,4-,5-fragments.
A web app for viewing plasmid maps & genomes, and simulating PCR and Gibson assembly
A library for simulating DNA assembly methods such as Gibson assembly
Gibthon Construct Designer - an interactive design tool for primers for use in the Gibson Assembly method.
Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning.
Simple utility to concatenate .fastq(.gz) files whilst creating a summary of the sequences.
Repository for scripts and resources used for metagenomics with Nanopore, PacBio and Illumina sequencing
Command line client and Python libraries for CosmosID API
This repository contains all ananlysis scripts for proteoform analysis with CCprofiler and COPF.
JAFFA is a multi-step pipeline that takes either raw RNA-Seq reads, or pre-assembled transcripts, then searches for gene fusions
Code and data for "Predicted Symptomatic Effectiveness of Pfizer-BioNTech BNT162b2 Vaccine Against Omicron Variant of SARS-CoV-2" paper