tobiasrausch
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lorax Public
A long-read analysis toolbox for cancer and population genomics
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nRex Public
nRex: Germline and somatic single-nucleotide, short indel and structural variant calling
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sv Public
Structural variant calling tutorial using long-reads.
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tobiasrausch.github.io Public
Homepage of Tobias Rausch
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covid19 Public
SARS-CoV-2 analysis pipeline for short-read, paired-end illumina sequencing
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wally Public
Wally: Visualization of aligned sequencing reads and contigs
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alfred Public
BAM Statistics, Feature Counting and Annotation
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vc Public
A tutorial on structural variant calling for short read sequencing data
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kmerdbg Public
Scripts to build and analyze compacted de Bruijn graphs
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RNAseq Public
RNA-Seq processing pipeline
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bcftools Public
Forked from samtools/bcftoolsThis is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html
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rayas Public
Templated insertion discovery
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rdxon Public
Reference-free FASTQ filter for rare germline and somatic variants
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ATACseq Public
Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)
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vcfaid Public
VCFaid: Genotype likelihood based GQ estimation
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lamp Public
LAMP testing (Covid screening)
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workflows Public
Workflows
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pods Public
Kubernetes (K8s) stuff
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coral Public
Coral: COpy-numbeR ALterations
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repliseq Public
Repli-Seq analysis pipeline
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circosplots Public
Scripts to generate circos plots
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allis Public
Allele-specific expression
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phaseBam Public
Phase a BAM file using a phased SNP scaffold
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bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
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