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eQTL-Catalogue-resources Public
Forked from FINNGEN/eQTL-Catalogue-resourcesHTML UpdatedApr 14, 2023 -
LocoColoc Public
Forked from RitchieLab/LocoColocConsolidation of ColocQuiaL, eQTLPlot and Sudha's Gene Based Coloc tools
R UpdatedApr 6, 2023 -
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rGREAT Public
Forked from jokergoo/rGREATGREAT Analysis - Functional Enrichment on Genomic Regions
R Other UpdatedApr 2, 2023 -
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susieR Public
Forked from stephenslab/susieRR package for "sum of single effects" regression.
R Other UpdatedFeb 18, 2023 -
systemsgenetics Public
Forked from molgenis/systemsgeneticsGeneric Java genotype reader / writer, QTL mapping software, Strand alignment tool
Java GNU General Public License v3.0 UpdatedFeb 7, 2023 -
mr.genius Public
Forked from tye27/mr.geniusA R package implements GENIUS-MAWII. Reference: Ting Ye, Zhonghua Liu, Baoluo Sun, and Eric Tchetgen Tchetgen (2021). GENIUS-MAWII: For Robust Mendelian Randomization with Many Weak Invalid Instrum…
R UpdatedFeb 5, 2023 -
INTACT Public
Forked from jokamoto97/INTACTIntegration of TWAS and Colocalization Analysis
R GNU Affero General Public License v3.0 UpdatedFeb 1, 2023 -
CTGCatalog Public
Forked from Cloufield/CTGCatalogA collection of commonly used resources for complex trait genetics.
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machine_learning Public
Forked from davetang/machine_learningMachine learning in R
R MIT License UpdatedDec 23, 2022 -
mrbma Public
Forked from mglev1n/mrbmaMendelian Randomization Bayesian Model Averaging
R Other UpdatedDec 1, 2022 -
GWASpops.pheno2geno Public
Forked from J-T-Nelson/GWASpops.pheno2genoR package for GWAS catalog extension which collects and visualizes allele frequency population data
R GNU Affero General Public License v3.0 UpdatedNov 25, 2022 -
metabrain Public
Forked from molgenis/metabrainVarious scripts to process RNAseq data for brain eQTL analysis
Python UpdatedNov 25, 2022 -
epigraphdb-breast-cancer Public
Forked from mvab/epigraphdb-breast-cancerBreast cancer risk factors exploration with MR-EvE and literature-mined data in EpiGraphDB
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smrivw Public
Forked from masadler/smrivwSMR-IVW extension of the SMR software
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BESIDEMR Public
Forked from CYShapland/BESIDEMRBayEsian Set IDEntification Mendelian randomization
R GNU General Public License v3.0 UpdatedNov 15, 2022 -
GbyE Public
Forked from liu-xinrui/GbyEEffect model of gene-environment interaction, involved in predictive analysis of GWAS and GS
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MAGMA_Celltyping Public
Forked from neurogenomics/MAGMA_CelltypingFind causal cell-types underlying complex trait genetics
R UpdatedNov 10, 2022 -
vargen Public
Forked from MCorentin/vargenVarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a list of tissues / gwas traits of interest to complete the re…
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FUMA-webapp Public
Forked from Kyoko-wtnb/FUMA-webappSource code of FUMA GWAS web application
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ewas-gwas-comparisons Public
Forked from thomasbattram/ewas-gwas-comparisonsHTML UpdatedNov 3, 2022 -
MR_template Public
Forked from apalmos/MR_templateTemplate for running PWMR on Rosalind
R UpdatedNov 1, 2022 -
allCardiacMRI Public
Genome-wide association on left atrial volume and function